A,B   C    D      E,F,G     H,I,L     M     N,O     P     R     S T,V,W,Y

MACAW – Multiple Alignment Construction & Analysis Workbench (M, W)

MacBoxshade – Creates good-looking printouts from multiple aligned proteins of DNA sequences (M, U)

MacPattern – Application for protein protein searches (using PROSITE) and block profile searches (using BLOCKS) (M)

MacPlasmap – Helps in the preparation of circular plasmid maps (M)

MacProt – Programs for analyzing protein sequences for the secondary structure, chain flexibility, hydropathy, helical wheels and so on (M)

MacStripe – Program for the prediction and analysis of potential coiled coil regions in protein sequences (M)

MacT – Programs for the construction and evaluation of unrooted trees derived from amino acid sequences using a distance matrix method (M)

Map Manager – Analyze the results of genetic mapping experiments (M, W)

MapMaker – Linkage analysis package (M, W, U)

Materials & Methods – Hypercard stack, for storage and retrieval of laboratory procedures (M)

Matilda – Specialised DNA database management system to extract high-level information for recombinant DNA experiments from large sequence and genetic information database (W)

MatInd and MatInspector – MatInd derives matrix description of a consensus from a number of short sequences. MatInspector uses large library of predefined matrix descriptions of transcription factor binding sites to locate matches in nucleotide sequences of unlimited length (M, W, U)

Memsat – MEMbrane protein Structure and Topology (W, U)

Metree – Package for inferring and testing minimum evolution trees (W)

MitoProt – Predicts mitochondrial proteins harboring targeting sequences (M, U)

Molwt – Calculates molecular weight from an entered chemical formula, and gives concentrations in various units in response to an entered formula and concentration (W)

Mfold – Michael Zucker's MFold software for prediction of RNA secondary structure (M)