(1) Functional features cause misfolding of the ALS-provoking enzyme SOD1
Nordlund, A.*, Leinartaite, L.*, Saraboji, K.*, Aisenbrey, C., Grobner, G., Zetterstrom, P., Danielsson, J., Logan, D.T., Oliveberg, M. ( * Equal contribution)
Proc. Natl. Acad. Sci. USA., 106, 9667-9672 (2009).
2008
(2) Systematic study on crystal-contact engineering of diphthine synthase: influence of mutations at crystal-packing regions on X-ray diffraction quality.
Mizutani, H., Saraboji, K., Malathy Sony, S.M., Ponnuswamy, M.N., Kumarevel, T., Krishna Swamy , B.S., Simanshu, D.K., Murthy, M.R.N., Kunishima, N.
Acta Cryst. D64, 1020-1033 (2008).
2007
(3) Prediction of protein mutant stability using classification and regression tool.
Huang, L-T., Saraboji, K., Ho, S-Y., Hwang, S-F., Ponnuswamy, M.N. and Gromiha,M.M.
Biophys. Chem., 125, 462-470 (2007).
2006
(4) Crystal structure of haemoglobin from donkey (Equus asinus) at 3Angstrom resolution.
Balasundaresan, D., Saraboji, K. and Ponnuswamy, M.N.
Biochimie, 88, 719-723 (2006) .
(5) Conformational aspects and interaction studies of heterocyclic drugs.
Ponnuswamy, M.N., Gromiha, M.M., Malathy Sony, S.M. and Saraboji, K.
Top. Heterocycl.Chem. 3, 81-147 (2006). REVIEW
(6) Average assignment method for predicting the stability of protein mutants.
Saraboji, K., Gromiha, M.M. and Ponnuswamy, M.N.
Biopolymers, 82, 80-92 (2006).
(7) Role of amino acid properties to determine backbone t(N-Ca-C') stretching angle in peptides and proteins.
Malathy Sony, S.M., Saraboji, K., Sukumar, N. and Ponnuswamy, M.N.
Biophys. Chem., 120, 24-31 (2006).
2005
(8) Relative importance of secondary structure and solvent accessibility to the stability of protein mutants: A case study with amino acid properties and energetics on T4 and human lysozymes.
Saraboji, K., Gromiha, M.M. and Ponnuswamy, M.N.
Comp. Biol. Chem., 29, 25-35 (2005).
(9) Importance of main-chain hydrophobic free energy to the stability of thermophilic proteins.
Saraboji, K., Gromiha, M.M. and Ponnuswamy, M.N.
Int. J. Biol. Macromol., 35, 211-220 (2005)
(10) Crystal structure of N1,N5-dibenzoyltetrahydro-4-methyl-1,5-benzodiazepin-2-one (DBTBO) and tetrahydro-4-methyl-one,5-benzodiazepin-2-one (TBO).
Nallini, A., Saraboji, K., Ponnuswamy, M.N., Venkatraj, M. and Jeyaraman, R.
Cryst. Res. Technol., 40, 622-626 (2005)
2004
(11) Purification and crystallization of haemoglobin from donkey (Equus asinus).
Balasundaresan, D., Saraboji, K and Ponnuswamy, M.N.
Biochem. Biophys. Res. Commun., 313, 466-467 (2004).
(12) Role of non-covalent interactions for determining the folding rate of two-state proteins.
Gromiha, M.M., Saraboji, K., Ahmad, S., Ponnuswamy, M.N. and Suwa, M.
Biophys. Chem., 107, 263-272 (2004).
(13) Structure and conformation of N-t-Butoxycarbonyl-L-valine-L-phenylaline methyl ester (Boc-Val-Phe-OMe).
Nallini, A., Saraboji, K., Ponnuswamy, M.N. and Katti, S.B.
Cryst. Res. Technol., 39, 179-184 (2004).
(14) Structure and conformation of a nickel complex:{2-Hydroxo-3-piperidine-1-ylmethyl-N,N'(bis -5-promobenzylpropylenediimine)nickel(II)perchlorate}.
Malathy Sony, S.M., Saraboji, K., Ponnuswamy, M.N., Manaonmani, J., Kandasamy, M., Fun, H.K.
Cryst. Res. Tech., 39,185-192 (2004).
(15) Crystallization and structural studies of N-benzyloxycarbonyl-L-Tyrosine-LGlysine- Ethyl Ester (Z-Tyr-Gly-Ole).
Nallini, A., Saraboji, K., Ponnuswamy, M.N. and Katti, S.B.
Cryst. Res. Technol., 39, 279-286 (2004).
(16) A study of aromatic hydrogen bonds for peptides with aromatic amino acid sidechains.
Nallini, A., Saraboji, K., Ponnuswamy, M.N.
Ind. J. Biochem. Biophys, 41, 184-187 (2004).
2003
(17) Crystal structures of pair of benzothiazepines.
Nallini, A., Saraboji, K., Ponnuswamy, M.N., Muthukumar, M. and Jeyaraman, R.
Mol. Cryst. Liq. Cryst., 393, 83-93 (2003).
(18) Crystal structure and conformation of two similar piperidones.
Nallini, A., Saraboji, K., Ponnuswamy, M.N., Venkatraj, M. and Jeyaraman, R.
Mol. Cryst. Liq. Cryst., 403, 49-56 (2003).
(19) Crystal structure and conformation of a pair of piperidine derivatives.
Nallini, A., Saraboji, K., Ponnuswamy, M.N., Venkatraj, M. and Jeyaraman, R.
Mol. Cryst. Liq. Cryst., 403, 57-65 (2003).
