(Zero) X, I'll clear out the enemies out here. You go ahead and deal with the ones inside.

(Mega Man) Mac where have you been? (Mac) You're far too trusting, X. I'm now a member of Doppler's Army! You will make a fine addition to our forces once you have been shown the true destiny of the Reploid race.

(Zero) Are you ok, X? (Mega Man) Thanks Zero, I'm ok. (Zero) I'll check around headquarters again. Be on your guard, X. 

(Zero) Looks like we've swept most of the enemies out of here. I'll go back and check on headquarters. Call me if you need me. See you later, X.

(Doppler) He is the Maverick Hunter I failed to catch last time. I had no idea he os so powerful. . . Bit and Byte! Bring that Maverick Hunter to me. . . alive if possible. (Bit, Byte) Affirmative, Dr. Doppler! (Mysterious Maverick) Alive, Dr. Doppler? You are so kind. (Doppler) Watch your mouth or I'll put you back where I found you. Even with your enhancements, you are still no match for me. (Mysterious Maverick) Thanks for the upgrade Doctor, but I have a score to settle. . . and I'll do it my way. . .  (Doppler) Fine. Just make sure you do it. I still can't believe that Maverick Hunter defeated my master twice in the past. . .

(Mega Man) Any problems Dr. Cain? (Dr. Cain) I pulled some memory chips from the Mavericks controlled by Dr. Doppler. I analyzed them and found that Dr. Doppler is trying to create a powerful new Battle Body by collecting the "special abilities" from the latest breed of Reploids. (Mega Man) Battle Body. . .? (Dr. Cain) First I thought Dr. Doppler was trying to create it for himself. But the information indicates that he will not be able to interface with it, so it must be for someone else. (Mega Man) Sigma!? (Zero) Can he still be alive?? (Dr. Cain) A hidden laboratory has been pinpointed at Point D. All indications are that it is Dr. Doppler's secret lab. You need to get there immediately. (Mega Man) On my way. . . . . . (Zero) It's time I put an end to Sigma for good!

(Zero) X, I've come to help you! I'll stop the collapsing!! You destroy that junk robot! X, there is an army of powerful Mavericks in Dr. Doppler's lab! They've been modified by Dr. Doppler into war machines. Be careful! (Mega Man) I'll watch my step, Thanks Zero.
(Zero) I'm going to scout around. I'll catch you later.
-- MIDDLE
(Bit) We've been waiting for you X! (Byte) Dr. Doppler modified us after our first battle against you. (Bit & Byte) Take a look at these new upgrades!!

(Doppler) I've been waiting for you X. I'm Dr. Doppler. I've been watching your battles closely.  Your victories over my men have been most impressive. I need superior reploids like yourself, X! I offer you the change to join us. Together we shall build a Utopia where the Reploids rule under the watchful eyes of Sigma, out lord and master. (Mega Man) No way, Doc! Your schemes end here and now!! (Doppler) Perhaps you are not as smart as I once thought! Prepare to be ripped apart and to be born again as part of the new body of Sigma! You are strong X. . . Strong enough to defeat Sigma. . . (Mega Man) Doppler, can you talk?! (Doppler) Sigma's true form os that of a computer virus. . . I was corrupted by him and. . . I created a horrific new body for him. . . (Mega Man) Where's the body now? (Doppler) It's in the underground hanger of this lab. . . I don't think Sigma has occupied it yet. . . Don't worry about me. . . Destroy the body before it is too late. Time is running out. (Mega Man) Thanks, Doc. . .

(Zero) I'll go ahead and destroy the power generator. X, you go upstairs and destroy Sigma's body.
-- ENDING
(Sigma) We meet again X. . .It was easy to corrupt that fool, Doppler. And I would have succeeded if you hadn't interfered. But we are always destined to meet, aren't we X? Let the eternal struggle begin!! Well done X. . . But I'm far stronger than my previous forms. Behold the power of the ultimate battle body!! N. . . No it can't be! I can't even defeat you with this magnificent body. .?! There seems to be only one choice now. . . I'll posses you! (Mega Man) Damn! It's a dead end. . . (Sigma) Ha ha ha. Give up X. I'll posses your body and rule the whole world!! Garrrr! You're. . . Zero. . . It's you. . . again. . . (Zero) How do you like that, Sigma? I picked up a Anti-Sigma virus program from Doppler and used it on my Beam Saber!! Sorry about the delay X. I thought the program might be the only thing that would work against Sigma. (Sigma) My program. . . is. . . disappearing. . . But. . . someday. . . I. . . will. . .

X has crushed Sigma's plan once again. But many questions still occupy his mind. . . . . . "Why must humans fight against Reploids. . . ?" "And, why must Reploids fight against each other. . ." As X stares at the burning remains of Doppler's lab, his body trembles from an unknown sorrow. What does fate have in store for me?" He wonder. He can only hope that someday Dr. Light's plan for him will finally be revealed. Unknown to X, his destiny has already been decides. To save mankind, he must destroy Zero. But only time will tell, when and why. . . . .