Standing on the shoulders of giants

Or having a really good telescope

 

•         Early microscope ca. 1673

•         Robert Hooke (1635-1703) in England

•         wrote Micrographia in 1667

•         many drawings

•         coined the term “cell”

•         Anton van Leeuwenhoek (1632-1723) in Holland

•         improved quality

 

Cell Theory

 

•         Schleiden & Schwann (1839) postulated theory

–        The cell is the fundamental unit of structure and function in living things

–        All living things are composed of cells

•         The third basic tenet comes from Virchow claimed (1855) powerful dictum, “Omnis cellula e cellula”

–        All cells arise from pre-existing cells

 

Light microscopes (LM) magnify up to 1500X but cannot resolve objects that are smaller than 200nm (about 0.2 microns).  

See handout

 

Into the subcellular

•         1950s brought electron microscopy (EM)

•         Resolution improved hundredfold (up to 2 nm – the diameter of DNA double helix)

•         New advances could bring resolution to 0.002nm – the diameter of an atom!

•         Researchers viewed cell “ultrastructure” for the first time

•         Scanning EM and Transmission EM most useful to biologists

 

Types of Cells

 

•         Two basic types

–        Eukaryote (“true” nucleus)

–        Prokaryote (“before” nucleus)

•         Cell type determines “domain of life”

•         Prokaryotes are found in Archaea and Bacteria

•         Eukarya include animals, plants, fungi, and protists

 

What’s common to all cells?

 

•         Plasma membrane – maintains cell integrity, regulates traffic, serves as protection

•         Cytosol – semi-fluid substance that allows chemical reactions to occur

•         Nucleic material – DNA and ribosomes

 

Cytosol

 

•         cytoplasm includes everything in the cell except the nucleus

•         cytosol is the soluble portion of the cytoplasm

•         Contains about 80% water, nucleic acids, proteins, lipids, carbohydrates, pigments, etc…

•         Variable viscosity

 

 How to ID a prokaryote

 

•         Cell has no nucleus (no membrane surrounding DNA)

•         DNA is “naked” and circular

•         May have cell wall, pili, flagella, mesosomes, capsule, and photosynthetic membranes (in addition to basic cellular features)

•         Unicellular, but may form colonies

•          

Eukaryotic cells

 

•         Have a well-defined nucleus

•         Complex organelles contained in cytosol

•         May be single- or multi-cellular

•         Exist in four kingdoms

–        Animalia  (see handouts for “typical” animal and plant cells)

–        Planta

–        Protista

–        Fungi

Nucleus

•         Contains most of the genetic material (linear chromosomes)

•         Average diameter 5 μm

•         Separated from cytoplasm by a double membrane (20-40 nm apart)

•         Nuclear pores allow traffic flow

•         Fluid interior termed “nucleoplasm”

•         Nuclear lamina maintain the shape of the nucleus

 

Nucleolus

•         Is a region, not a structure!

•         Site of ribosome construction (rRNA and proteins assembled into ribosomal subunits)

•         Subunits flow out into cytoplasm and  combine the two (large and small) subunits to form functional ribosomes

•         Cells that synthesize large quantities of protein have prominent nuclei and thousands of ribosomes

 

Ribosomes

 

•         Ribosomes are the workbenches upon which proteins are synthesized

•         Ribosomes may be “free” in the cytosol, or “bound” to the ER—location dictated by type of polypeptide

 

Endomembrane system

 

•         Many membrane-bound organelles make up the endomembrane system

•         Vesicles contact organelles directly, or indirectly through transfer of materials

•         Includes the nuclear envelope, ER, Golgi apparatus, lysosomes, vacuoles, and the plasma membrane

 

Why all these organelles?

•         Compartmentalization

•         Organelles help to increase internal surface area

•         Organelles maintain duties and functions that would otherwise fall upon the plasma membrane

 

Endoplasmic reticulum (ER)

 

•         Comprises 50% of internal membrane

•         Rough ER: appearance due to bound ribosomes

–        Functions in protein modification and export, some membrane synthesis

•         Smooth ER-appears smooth

–        Functions in metabolism, and synthesis of lipids, and energy mobilization; plays key role in alcohol and drug detoxification in liver

–        In muscle cells, the sarcoplasmic ER holds Ca++ to be mobilized when the muscle contracts

•         The smooth ER includes transitional ER: sites of vesicle formation

•         The rough ER is connected to the nuclear envelope

 

Golgi apparatus

•         Centre of manufacturing, warehousing, packaging, and shipping

•         Transport vesicles from ER will travel to Golgi for further modifications and packaging

•         Cells that specialize in secretion of products have extensive Golgi apparatus

•         One side (cis side) receives material; the other (trans side) releases end-products

•         During the transit from cis to trans side, products are modified. Modifications include adding sugars onto proteins

(glycoproteins) destined for the plasma membrane.

 

Lysosomes

•         Hydrolyze proteins, fats, polysaccharides, and nucleic acids

•         Sometimes called a “suicide bag” – involved in self-destruction of cell

•         Interior is more acidic (pH 5) than cytosol

•         Lysosome enzymes and membrane are made in the ER, sent to the Golgi, and bud from both the cis and trans side of the Golgi

•         Frogs and fingers? Lysosomes recyle!

•         fuse with food vacuoles to digest incoming food particles

•         destroy or recycle damaged organelles

•         Participate in programmed destruction of cells

 

Vacuoles

 

•         Vesicles and vacuoles (larger version) are membrane-bound sacs with various functions

•         Food vacuoles: from phagocytosis, fuse with lysosomes

•         Central vacuoles: found in mature plant cells

•         Contractile vacuoles: found in freshwater protists to pump out excess water

 

Central vacuole

 

•         Surrounded by single membrane, the tonoplast

•         Tonoplast regulates traffic of solutes and pigments, stores ions and proteins

•         Stores destructive metabolic by-products and defensive compounds against herbivores

 

Mitochondria and chloroplasts

 

•         Are not part of the endomembrane system

•         Both contain a naked circular DNA molecule of their very own

•         Both grow and reproduce as autonomous organelles

•         Both have more in common with bacteria than with the cell in which they reside

•         Both can move around inside the cell along cytoskeleton “tracks”

 

The mitochondrion

•         Mitochondrion (sing) – mitochondria (plural)

•         Double-membrane

•         Own ribosomes (and genetic code!)

•         Some proteins coded for in nuclear DNA, proteins made on free ribosomes, imported into mitochondrion

•         Number per cell depends on cell’s function

•         Found in animals AND plants (as well as fungi and protists)

 

Chloroplast

 

•         A plastid found only in plants and protists

•         Other plastids include amyoplasts (starch storage) and chromoplasts (pigment storage)

•         Chloroplasts develop when plastids are stimulated by sunlight (stems and leaves)

•         Contain the green pigment, chlorophyll

•         May be visible under LM

•         Double-membrane

•         Inner membrane system of chlorophyll-containing thylakoids (stacked into grana)

•         Own ribosomes (and genetic code!)

•         Fluid interior termed stroma

•         Number per cell depends on cell’s function

 

Peroxisomes

•         In animal and plant cells

•         Single membrane

•         Contains enzymes that transfer H+ to oxygen

•         Produces hydrogen peroxide which must be converted to water, this enzyme is often called “catalase”

 

Cytoskeleton

•         Essential for support, motility and regulation

•         Dynamic structure responds to pressure and inner tension

•         Provides anchorage and movement for organelles

•         Motility achieved through motor proteins interacting with cytoskeleton

•         Three types of fibres: microtubules,  microfilaments and intermediate filaments

 

Centrosomes and centrioles

 

•         Plants and animal cells contain centrosomes (a region from which microtubules grow to form spindles during cell division)

•         Animal cells contain a pair of centrioles within their centrosomes

•         Centrioles contain 9 triplets of microtubules arranged in a ring

•         Centrioles replicate during cell division

 

Cilia and Flagella

 

•         (cilium and flagellum – singular)

•         Similar diameter and structure- anchored in the cell by basal body (centrioles)

•         Very important for motility in protists (unicellular eukaryotes) and sperm

•         Cilia are shorter, more numerous, and have an oar-like pattern of motion

•         Flagella are longer, only one or two per cell, and beat in an undulating motion

Plant Cell Wall

•         Rarely absent from plant cells

•         Never found in animal cells

•         Much thicker and stronger than plasma membrane

•         Composition is mainly cellulose, but may also contain other polysaccharides (including pectin)

•         Aids in protection, support, transport, and water regulation

•         Communicating junctions are called plasmodesmata

 

Cellular junctions

•         Cells may organize into tissues and organs

•         Communication and physical interactions require special structures

Communicating junctions: Plasmodesmata (plants) and gap junctions (animals)

Adhering junctions: desmosomes (animals only)

Tight junctions (animals only)

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

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