14.1. Mendelism and the Genotype

    A. Incomplete Dominance and Codominance

        1. Incomplete dominance: offspring show traits intermediate between two parental phenotypes.
            a. Red and white-flowered four o'clocks produce pink-flowered offspring.
            b. Incomplete dominance has a biochemical basis; level of gene-directed protein production may
                be between that of the two homozygotes.
            c. One allele of a heterozygous pair only partially dominates expression of its partner.
            d. This does not support a blending theory; parental phenotypes reappear in F2 generation.
        2. Codominance is a pattern of inheritance in which both alleles of a gene are expressed.
            a. A person with AB blood has both A and B antigens on their red blood cells.
            b. With codominance, both alleles produce and effective product.

    B. Genes That Interact

        1. More than one pair of genes may interact to produce the phenotype.
        2. Epistasis: absence of expected phenotype as a result of masking expression of one gene pair by the
            expression of another gene pair.
            a. The homozygous recessive condition masks the effect of a dominant allele at another locus.
            b. Crossing sweet pea plants produces purple; F2 generation has a 9:7 rather than 9:3:3:1 dihybrid
                ratio; explained by homozygous recessive blocking production of a metabolic enzyme.
            c. Albino animals inherit allelic pair (aa) preventing production of melanin, expression of eye, hair, color.

    C. Pleiotropy

        1. Pleitropy: a single gene exerts an effect on many aspects of an individual's phenotype.
            a. Marfan syndrome: a mutant gene is unable to code for production of a normal protein, fibrillin.
            b. Results in the inability to produce normal connective tissue.
            c. Individuals with Marfan syndrome tend to be tall and thin with long legs, arms, and fingers; are
                nearsighted; and the wall of their aorta is weak.
            d. From his lanky frame and other symptoms, Abraham Lincoln may have had Marfan syndrome.

    D. Multiple Alleles

        1. There may be more than two alleles for one locus, but each individual inherits only tow alleles.
        2. A multiple allele system is peppered moths has three possible alleles for wing color in order of
            dominance: M > M' > m; therefore, there are three possible phenotypes.
        3. The ABO system of human blood type involves three alleles (A, B, and O).
        4. As a result, there are four possible phenotypes or blood types: A, B, AB, and O.

    E. Polygenic Inheritance

        1. Polygenic inheritance occurs when a trait is controlled by several allelic pairs at different loci.
        2. Allelic pairs at different loci on a chromosome or on different chromosomes all control one trait.
        3. Gene alleles can be contributing or non-contributing.
        4. Contributing alleles have an addictive effect, resulting in quantitative variations.
        5. Examples include seed color in wheat and skin color and height in humans.
        6. Polygenic traits are subject to environmental effects that cause intermediate phenotypes; so they
            produce continuous variations whose frequency distribution forms a normal (bell-shaped) curve.

    F. Environment and the Phenotype

        1. Both genotype and environment affect phenotype; relative importance of both influences vary.
        2. Aquatic environment (above and below water level) influences the phenotype of water buttercup,
            Ranunculus peltatus.
        3. Temperature can affect the phenotypes of some plants (e.g., primroses) and animals
            (e.g., Siamese cats, Himalaya rabbits).

14.2. Mendelism and Chromosomes

    A. Chromosomal Theory of Inheritance

        1. Genes are located on chromosomes; behavior of chromosomes during mitosis was described in
            1875 and for meiosis, in 1890's.
        2. Chromosome theory independently proposed in 1902 by Theodor Boveri and Walter S. Sutton.
        3. Accounts for the similarity of chromosomal behavior during meiosis and fertilization.
        4. Theory is supported by the following observations:
            a. Both chromosomes and factors (now called alleles) are paired in diploid cells.
            b. Chromosomes and alleles of each pair separate during meiosis so gametes have one-half.
            c. Chromosomes and alleles of separate independently; gametes contain all combinations.
            d. Fertilization restores diploid chromosome number and paired condition for alleles in zygote.

    B. Sex Chromosomes

        1. In most animal species, chromosomes can be categorized as two types:
            a. Autosomes are non-sex chromosomes that are the same number and kind between sexes.
            b. Sex chromosomes determine if the individual is male or female.
        2. Sex chromosomes in the human female are XX; those of the male are XY.
        3. Males produce X-containing and Y-containing gametes; therefore males determine the sex of offspring.
        4. Besides genes that determine sex, sex chromosomes carry many genes for traits unrelated to sex.
        5. X-linked gene is any gene located on X chromosome; used to describe genes on X chromosome that
            are missing on the Y chromosome.

    C. X-Linked Alleles

        1. Work with fruit flies by Thomas Hunt Morgan (Columbia University) confirmed genes were on chromosomes.
            a. Fruit flies are cheaply raised in common laboratory glassware.
            b. Females only mate once and lay hundreds of eggs.
            c. Fruit fly generation time is short, allowing rapid experiments.
        2. Experiments involved fruit flies with XY system similar to human system.
            a. Newly discovered mutant male fruit fly had white eyes.
            b. Cross of white-eyed male with dominant red-eyed female yield expected 3:1 red-to-white ratio;
                however, all white-eyed flies were males!
            c. An allele for eye color on the X but not Y chromosome supports the results of the cross.
            d. Behavior of allele corresponds to chromosome, confirming chromosomal theory of inheritance.
        3. X-Linked Problems
            a. X-linked alleles are designated as superscripts to X chromosome.
            b. Heterozygous females are carriers; they do not show the trait but can pass it on.
            c. Males are never carriers but express the one allele on the X chromosome.
            d. One form of color-blindness is X-linked recessive.

    D. Linkage Groups

        1. Fruit flies have four pairs of chromosomes to hold thousands of genes; Sutton concluded each
            chromosome must hold many genes.
        2. All alleles on a chromosome form a linkage group that stays together except when crossing over.
        3. Crossing-over causes recombinant gametes and at fertilization, recombinant phenotypes.
        4. Linked alleles do not obey Mendel's laws because they tend to go into the gametes together.
        5. Crosses involving linked genes do not give same results as unlinked genes.
        6. Heterozygote forms only two types of gametes and produces offspring with only two phenotypes.
 

    E. Chromosome Mapping

        1. Percentage of recombinant phenotypes measures distance between genes to map the chromosomes.
        2. Linked genes indicate the distance between genes on the chromosomes.
        3. If 1% of crossing-over equals one map unit, then 6% recombinants reveal 6 map units between genes.
        4. If crosses are performed for three alleles on a chromosome, only one map order explains map units.
        5. Humans have few offspring and a long generation time, and it is not ethical to designate matings;
            therefore biochemical methods are used to map human chromosomes.

14.3. Chromosomal Mutations

    A. Mutations

        1. Changes in chromosomes or genes that pass to offspring if they occur in gametes.
        2. Mutations increase the amount of variation among offspring.
        3. Chromosomal mutations include changes in chromosome number and structure.

    B. Changes in Chromosome Number

        1. Monosomy occurs when and individual has only one of a particular type of chromosome.
        2. Trisomy occurs when and individual has three of a particular type of chromosome.
        3. Nondisjunction is the failure of chromosomes to separate; it is more common during meiosis I than
            meiosis II; it can occur in mitosis.
        4. Monosomy and trisomy occur in plants and animals; in autosomes of animals, it is generally lethal.
        5. Nonlethal human monosomies and trisomies include the following:
            a. Turner syndrome: monosomy where the individual has single X chromosome.
            b. Down syndrome is most common trisomy among humans; it involves chromosome 21.
        6. Polyploidy: offspring end up with more than two complete sets of chromosomes.
            a. Terms indicate how many sets of chromosomes are present (triploids [3n], tetraploids [4n], etc.).
            b. Polyploidy does not increase variation in animals; judging from trisomies, it would be lethal.
            c. Polyploidy is a major evolutionary mechanism in plants; probably involved in 47% of flowering
                plants including major crops.
            d. Hybridization in plants can result in doubled number of chromosomes; an even number of chromosomes
                can undergo synapsis during meiosis; successful polyploidy results in a new species.

    C. Changes in Chromosomal Structure

        1. Environmental factors including radiation, chemicals, and viruses, can cause chromosomes to break;
            if the broken ends do not rejoin in the same pattern, this causes a change in chromosomal structure.
        2. Inversion: a segment that has become separated from the chromosome is reinserted at the same place
            but in reverse; the position and sequence of genes are altered.
        3. Translocation: a chromosomal segment is removed from one chromosome and inserted into another,
            nonhomologous chromosome. Translocation heterozygotes usually have reduced fertility due to
            production of abnormal gametes.
        4. A deletion is a type of mutation in which an end of a chromosome breaks off or when two simultaneous
            breaks lead to the loss of a segment.
            a. Even if only one member of pair of chromosomes is affected, a deletion can cause abnormalities.
            b. Cri du chat syndrome is deletion in which an individual has a small head, is mentally retarded, has
                facial abnormalities, and abnormal glottis and larynx resulting in a cry resembling that of a cat.
        5. A duplications is a doubling of a chromosomal segment.
            a. A broken segment from one chromosome can simply attach to its homologue.
            b. Unequal crossing-over may occur.
        6. Multiple copies of genes can mutate differently and provide additional genetic variation for a species.

14.4 A. Karyotypes

        1. Human somatic (body) cells have 22 pairs of autosomes, one pair of sex chromosomes; total of 46.
        2. Karyotypes shows chromosomes paired according to size, shape, and appearance in metaphase.
            a. To view chromosomes, cells are treated and photographed just prior to dividing.
            b. Chromosomes are then sorted and arranged by homologous pairs, often by computer imaging.
            c. Members of a pair have the same size, shape, and banding pattern.
            d. Chromosomes in a karyotype are aligned from largest to smallest.
            e. A karyotype can be used to diagnose chromosomal abnormalities.
        3. Sex chromosomes of a normal male are X and Y; a normal female has two X chromosomes.
        4. All chromosomes besides X and Y are autosomes.
        5. To view chromosomes of an unborn child, cells must be sampled from an embryo.
            a. Chorionic villi sampling removes a small tissue sample from the embryo side of the placenta.
            b. Amniocentesis uses a long needle to extract fetal cells floating in the amniotic fluid.

    B. Nondisjunction

        1. Nondisjunction during meiosis causes an abnormal chromosome number in gametes produced.
        2. Nondisjunction is a failure of one or more chromosomes to separate.
        3. Nondisjunction can occur when homologous chromosomes fail to separate during meiosis I or
            when daughter chromosomes fail to separate during meiosis II.
        4. Results in gametes with either two few (n - 1) or too many (n + 1) chromosomes.
        5. If abnormal gametes fertilize normal gametes, a monosomy (2n - 1) or trisomy (2n + 1) results.
        6. A syndrome is the set of symptoms that occur with a medical condition.

    C. Down Syndrome

        1. Down syndrome is most common autosomal trisomy, involves chromosome 21.
        2. Most often, Down syndrome results in three copies of chromosome 21 due to nondisjunction during gametogenesis.
            a. In 23% of cases, the sperm had the extra chromosome 21.
            b. In 5% of cases, there is translocation with chromosome 21 attached to chromosome 14; this translocation
            could have occurred generations earlier and is not age-related.
        3. Chances of a woman having Down syndrome child increase with age.
        4. Chorionic villi sampling testing or amniocentesis and karyotyping detects a Down syndrome child.
        5. Down syndrome child has tendency for leukemia, cataracts, faster aging, and mental retardation.
        6. Gart gene, located on bottom third of chromosome 21, leads to high level of purines and is associated
            with mental retardation; future research may lead to suppression of this gene.

    D. Abnormal Sex Chromosomal Inheritance

        1. Turner (XO) syndrome females have only one sex chromosome, and X.
            a. Turner females are short, have broad chest and webbed neck.
            b. Ovaries of Turner females never become functional; therefore, do not undergo puberty.
        2. Klinefelter syndrome males have one Y chromosome and two or more X chromosomes.
            a. Affected individuals are sterile males; testes and prostate are underdeveloped.
            b. Individuals have large hands and feet and long arms and legs.
        3. Triplo-X females have three or more X chromosomes.
            a. There is no increased femininity; most lack any physical abnormalities.
            b. There is an increased risk of having triplo-X daughters of XXY sons.
            c. May experience menstrual irregularities, including early onset of menopause.
        4. XYY males with Jacob syndrome have two Y chromosomes instead of one.
            a. Results from nondisjunction during meiosis II.
            b. Usually taller than average; suffer from persistent acne; tend to have lower intelligence.
            c. Earlier claims that XYY individuals were likely to be aggressive are not correct.

    E. Fragile X Syndrome

        1. X chromosome is nearly broken; most often found in males.
        2. As children: hyperactive or autistic; delayed speech; account for part of higher proportion of males
            in institutions for mentally retarded.
        3. As adults: large testes, unusually protruding ears.
        4. Occurs in females, but symptoms are less severe.
        5. Passes from symptomless male carrier to grandson.
        6. Traced to excessive repeats of base triple CGG (cytosine, guanine, guanine); up to 230 copies compared
            to normal 6-to-50 copies.

14.5. Autosomal Genetic Disorders

    A. Predicting Offspring

        1. Genetic disorders are medical conditions caused by alleles inherited from parents.
        2. Males are designated by squares, females by circles; shaded circles and squares are affected individuals;
            line between square and circle represents a union; vertical line leads to offspring.
        3. A carrier is a heterozygous individual who has no apparent abnormality but can pass on an allele for a
            recessively inherited genetic disorder.
        4. Autosomal dominant and autosomal recessive alleles have different patterns of inheritance.
            a. Characteristics of autosomal dominant disorders
                1) Affected children usually have an affected parent.
                2) Heterozygotes are affected. Two affected parents can produce unaffected child; two unaffected parents
                    will not have affected children.
            b. Characteristics of autosomal recessive disorders
                1) Most affected children have normal parents since heterozygotes have a normal phenotype.
                2) Two affected parents always produce and affected child.
                3) Close relatives who reproduce together are more likely to have affected children.
        5. Chance has no memory; each child born to heterozygous parents has a 25% chance of having a disorder
            regardless of prior siblings' conditions.

    B. Autosomal Dominant Disorders

        1. Neurofibromatosis
            a. This is an autosomal dominant disorder that affects one in 3,000 people (or 100,000 in U.S.).
            b. Affected individuals have tan skin spots at birth, which develop into benign tumors.
            c. Neurofibromas are lumps under the skin comprised of nerve cells or other cell types.
            d. Most case symptoms are mild, patients live a normal life; sometimes symptoms are severe:
                1) skeletal deformities, including a large head;
                2) eye and ear tumors that can lead to blindness and hearing loss; and
                3) learning disabilities and hyperactivity.
                4) Such variation is called variable expressivity.
            e. Gene that codes for neurofibromatosis is huge; includes three smaller nested genes.
                1) It was discovered in 1990 on chromosome 17.
                2) It is a tumor-suppressor gene active in controlling cell division.
                3) When it mutates, a benign tumor results.
        2. Huntington Disease
            a. This is also an autosomal dominant disorder that affects one in 20,000 people.
            b. It leads to progressive degeneration of brain cells, which in turn causes severe muscle spasm,
                personality disorders, and death in 10 -15 years from onset.
            c. Most appear normal until they are of middle age and already have had children who might carry
                the gene; occasionally, first signs of the disease are seen in teenagers or even younger.
            d. The gene for Huntington disease is located on chromosome 4.
            e. Gene contains many repeats of base triple CAG (cytosine, adenine, guanine); normal persons have
                11-34 copies; affected persons have 42-120 or more copies.
            f. Severity and time of onset of associated disorders depend on number of triplet repeats.
            g. Apparently, persons most at risk are those inheriting the gene from their fathers.
                1) Genomic imprinting is hypothesis that risk varies by source of gene (sex of parent).
                2) Genes may be imprinted differently during formation of sperm and egg.

    C. Autosomal Recessive Disorders

        1. Cystic Fibrosis
            a. This is most common lethal genetic disease in Caucasians in U.S.
            b. About 1 in 20 Caucasians is a carrier, and about 1 in 2,500 births has this disorder.
            c. Involves production of viscous form of mucus in the lungs and pancreatic ducts.
                1) Resultant accumulation of mucus in the respiratory tract interferes with gas exchange.
                2) Digestive enzymes must be mixed with food to supplant the pancreatic juices.
            d. New treatments have raised average life expectancy to 17-28 years.
            e. Chloride ions (Cl-) fail to pass plasma membrane proteins.
            f. Since water normally follows Cl-, lack of water in the lungs causes thick mucus.
            g. Cause is mutated gene on chromosome 7; attempt to insert gene into nasal epithelium has had
                limited success and restores about 25% of Cl- ion transport ability.
            h. Genetic testing for adult carriers and fetuses is possible.
        2. Tay-Sachs Disease
            a. Usually occurs among Jewish people in the U.S. of central and eastern European descent.
            b. Symptoms are not initially apparent; infant's development begins to slow at 48 months, neurological
                and psychomotor difficulties become apparent, child gradually becomes blind and helpless, develops
                seizures, eventually becomes paralyzed, dies by age of three or four.
            c. Results from lack of enzyme hexosaminidase A (Hex A) and subsequent storage of its substrate,
                glycosphingolipid, in lysosomes.
            d. Primary sites of storage are cells of the brain; accounts for progressive deterioration.
            e. No treatment or cure; prenatal diagnosis is by amniocentesis and chorionic villi sampling.
        3. Phenylketonuria (PKU)
            a. PKU occurs 1 in every 5,000 births; it is most common inherited disease of nervous system.
            b. Lack of enzyme needed to metabolize amino acid phenylalanine results in accumulation of the amino
                acid in nerve cells of the brain; this impairs nervous system development.
            c. PKU is caused by a mutated gene on chromosome 12.
            d. Now newborns are routinely tested in hospital for high levels of phenylalanine in the blood.
            e. If infant has PKU, child is placed on diet low in phenylalanine until brain is fully developed near age 7.

    E. Beyond Simple Mendelian Inheritance

        1. Polygenic Inheritance
            a. Polygenic inheritance occurs when one trait is governed by two or more sets of alleles.
            b. Dominant alleles have a quantitative effect on the phenotype: each adds to the effect.
            c. Result is a continuous variation in phenotypes: a bell-shaped curve.
            d. A hybrid cross for skin color provides a range of intermediates.
            e. Includes cleft lip, clubfoot, hypertension, diabetes, schizophrenia, allergies and cancers.
            f. Behavioral traits including suicide, phobias, alcoholism, and homosexuality may be associated
                with particular genes but are not likely completely predetermined.
        2. Multiple Alleles
            a. Occur where a gene has three or more alternative expressions (alleles).
            b. The ABO system of human blood type is a multiple allele system.
                1) Two dominant alleles (A and B) code for presence of A and B antigens on red blood cells.
                2) Also includes recessive allele (o) coding for no A or B antigens on red blood cells.
                3) As a result, there are four possible phenotypes (blood types): A, B, AB, and O.
            c. The Rh factor is inherited independently from the ABO system; the Rh+ allele is dominant.
        3. Sickle-cell disease is a blood disorder controlled by incompletely dominant alleles.
            a. Codominance occurs when alleles are equally expressed in a heterozygote.
            b. HbA HbA individuals are normal; HbS HbS have sickle-cell trait.
            c. With sickle-cell disease, red blood cells are irregular in shape (sickle-shaped) rather than biconcave,
                due to abnormal hemoglobin that the cells contain.
            d. Due to irregular shape, sickle-shaped red blood cells clog vessels and break down; results in poor
                circulation, anemia, low resistance to infection, hemorrhaging, damage to organs, jaundice, and pain
                of abdomen and joints.
            e. Persons heterozygous for sickle-cell (HbAHbS) are usually asymptomatic unless stressed.
            f. In malaria regions of Africa, infants heterozygous (HbAHbS) for sickle-cell allele have better chance
                of surviving; malaria parasite dies as potassium leaks from sickled cells.
            g. Bone marrow transplants pose high risks; other research focuses on fetal hemoglobin, etc.

14.6  Sex-linked Genetic Disorders

    A. Sex Chromosomes

        1. Traits controlled by alleles on sex chromosomes are sex-linked.
        2. Since Y chromosome is smaller, most sex-linked genes are on the X chromosome.

    B. X-Linked Recessive Disorders

        1. Males receive X-linked traits from mother, source of male's only X chromosome.
        2. If female shows a recessive sex-linked trait, her father must have it and her mother is carrier.

    C. Some Disorders Are X-Linked

        1. Color Blindness
            a. Can X-linked recessive disorder involving mutations of genes coding for green or red sensitive cone
                cells, resulting in inability to perceive green or red, respectively.
            b. The possible genotypes for color blindness are as follows:
                1) XB XB = a female who has normal color vision;
                2) XBXb = a carrier female who has normal color vision;
                3) XbXb = a female who is color blind;
                4) XBY = a male who has normal color vision; and
                5) XbY = a male who is color blind.
        2. Duchenne Muscular Dystrophy
            a. Duchenne muscular dystrophy is most common form; characterized by wasting away of muscles,
                eventually leading to death; it affects one out of every 3,600 male births.
            b. X-linked recessive disease involves a mutant gene that fails to produce protein dystrophin.
            c. Symptoms (e.g., waddling gait, toe walking, frequent falls, difficulty in rising) soon appear.
            d. Muscle weakens until individual is confined to wheelchair; death usually occurs by age 20.
            e. Affected males are rarely fathers; the gene passes from carrier mother to carrier daughter.
            f. Lack of dystrophin caused calcium ions to leak into muscle cells; this promotes action of an enzyme
                that dissolves muscle fibers.
            g. As body attempts to repair tissue, fibrous tissue forms and cuts off blood supply.
            h. Test detects carriers of Duchenne muscular dystrophy; treatments are under research.
        3. Hemophilia
            a. About one in 10,000 males is a hemophiliac with impaired ability of blood to clot.
            b. Hemophilia has tow types: Hemophilia A is due to absence of clotting factor IX; Hemophilia B is
                due to absence of clotting factor VIII.
            c. Hemophiliacs bleed externally after an injury and also suffer internal bleeding around joints.
            d. Hemorrhages stop with transfusions of blood (or plasma) or concentrates of clotting protein.
            e. Hemophiliacs were at high risk of AIDS if receiving blood or using blood concentrate to replace clotting factors.
            f. Factor VIII is now available as a genetic engineering product.
            g. Of Queen Victoria's 26 offspring, 5 grandsons had hemophilia, 4 granddaughters were carriers.

    D. Some Traits are Sex-influenced

        1. Some genes not located on the X or Y chromosome are expressed differently in the two sexes.
        2. Male pattern baldness is caused by an autosomal allele that is dominant in males and due to presence
            of testosterone.

 

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