total RNA isolation from plants
starting material: 2 ml eppendorf cup filled to the 500 ml mark with frozen and grinded plant material
- add 1 ml GTC-lysis buffer + 1% b-Me
- homogenise with pistill
- shake for 30 min at 37 °C
- spin 15 min at 4 °C
- put supernatant in new 2 ml eppendorf
- add 1/50 volume 3M NaAcetate and 0.75 volume ethanol
- incubate 2 h - overnight at -20 °C
- spin 15 min at 4 °C, remove supernatant
- resuspend pellet in 700 ml TES
- add 700 ml phenol, shake for 5 min
- centrifuge for 5 min
- take 650 ml upper phase into a new 2 ml eppie
- add 700 ml chloroform, shake for 5 min
- centrifuge for 5 min
- take 600 ml upper phase into a new 2 ml eppie
- add 200 ml 8M LiCl
- incubate overnight at 4 °C
- spin 15 min at 4 degrees, remove supernatant
- redissolve pellet in 300 ml water
- add 25 ml 3M NaAcetate and 750 ml ethanol
- incubate 2h - overnight at -20 °C
- spin 15 min at 4 °C
- remove supernatant
- redissolve pellet in 30 - 50 ml water
GTC-lysis buffer
4M Guanidinium-isothiocyanate
10 mM EDTA
50 mM HEPES/KOH pH 7.5
2% Laurylsarcosin
1% b-Me
TES
TE + 0.1 % SDS