JTW's Evolutionary Origins - Author: Wachtershauser, Gunter

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Reactions Involved in the Chemoautotrophic Metabolism


Rxn a:
Reductive Carboxylation

Postulate 2

[pp. 127]

R-COSH + CO2 + FeS --a--> R-CO-COOH + FeS2

note:

Hydrogen Sulphide has a catalytic and energetic function.
The carboxylate groups (-COOH) of all constituents are here assumed
to be in an equilibrium with small amounts of thiocarboxylate groups (-COSH).
In the prescence of H2S the carbonyl groups will exist in the thioenol form.
This is expected to lower the dG`, especially at increased pressures.
It is the thioenol form of the thiocarboxylate groups
that undergo reductive carboxylation according to Rxn a.

Example #1a

[From: RCC pathway - Fig.5]

As written:

Acetate (Ac) --a--> Thioenol-Pyruvate (TPy)

COOH-CH3 --a--> COOH-C(SH)=CH2

Breakdown:

Acetate (Ac) <==H2S==> Thioacetate (TAc)

COOH-CH3 <==H2S==> COSH-CH3

Thioacetate (TAc) --a--> Thioenol-Pyruvate (TPy)

COSH-CH3 --a--> COOH-C(SH)=CH2

Thioenol-Pyruvate (TPy) <==H2S==> Pyruvate (Py)

COOH-C(SH)=CH2 <==H2S==> COOH-CO-CH3

note:

[pp. 127]

Pyruvate in the presence of H2S, under anaerobic conditions, is in equilibrium with it's thioenol-form Thioenol-pyruvate.


Example #2a

[From: RCC pathway - Fig.5]

As written:

Succinate (Su) --a--> 2-Ketoglutarate (KG)

COOH-CH2-CH2-COOH --a--> COOH-CH2-CH=C(SH)-COOH

2-Thioenol-glutarate

Breakdown:

Succinate (Su) <==H2S==>

COOH-CH2-CH2-COOH <==H2S==> COOH-CH2-CH2-COSH

--a-> 2-Thioenol-glutarate

COOH-CH2-CH2-COSH --a-> COOH-CH2-CH=C(SH)-COOH

2-Thioenol-glutarate <==H2S==> 2-Ketoglutarate (KG)

COOH-CH2-CH=C(SH)-COOH <==H2S==> COOH-CH2-CH2-CO-COOH

note:

2-Ketoglutarate in the presence of H2S, under

anaerobic conditions, is in equilibrium with it's

thioenol-form


Example #3a

[From: (KG) to Glutarate Pathway - Fig.7]

As written:

Fumarate (Fu) --a-->

COOH-CH=CH-COOH --a--> COOH-CH=CH-CO-COOH

Breakdown:

Fumarate (Fu) <==H2S==>

COOH-CH=CH-COOH <==H2S==> COOH-CH=CH-COSH

--a-->

COOH-CH=CH-COSH --a--> COOH-CH=CH-CO-COOH


Source: (Wachtershauser, 1992)
  • Wachtershauser, Gunter
    • Groundworks for an Evolutionary Biochemistry: The Iron-Sulphur World
    • Progress in Biophysics and Molecular Biology: Vol. 58, No. 2, pp.85-202
    • 1992
    • [Pubmed]

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