| Scientific name | Common name |
| Family: Petropodidae: | |
| Rousettus aegyptiacus | Egyptian Fruit Bat |
| Family: Rhinopomatidae: | |
| Rhinopoma hardwickii | Lesser Mouse-tailed Bat |
| Rhinopoma microphyllum | Larger Mouse-tailed Bat |
| Family: Emballonuridae: | |
| Taphozous nudiventris | Naked-bellied Tomb Bat |
| Taphozous perforatus | Geoffry's Tomb Bat |
| Family: Rhinolophidae: | |
| Rhinolophus ferrumequinum | Larger Horseshoe Bat |
| Rhinolophus clivous | Arabian Horseshoe Bat |
| Rhinolophus hipposideros | Lesser Horseshoe Bat |
| Rhinolophus euryale | Mediterranean Horseshoe Bat |
| Rhinolophus mehelyi | Mehely's Horseshoe Bat |
| Rhinolophus blasii | Peter's Horseshoe Bat |
| Family: Hipposideridae: | |
| Asellia tridens | Trident Leaf-nosed Bat |
| Family: Vespertilionidae: | |
| Myotis emarginatus | Geoffrey's Bat, Notch-eared Bat |
| Myotis capaccinii | Long-fringed Bat |
| Myotis natterei | Nattere's Bat |
| Pipistrellus pipistrellus* | Common Pipistrelles |
| Pipistrellus Kuhlii | Kuhl's Pipistrelles |
| Pipistrellus rueppellii* | Riippell's Bat |
| Pipistrellus bodenheimeri | Bodenheimer Pipistrelles |
| Pipistrellus ariel | Pygmy Pipistrelles |
| Nyctalus noctua* | Common noctule |
| Eptesicus serotinus* | Serotine |
| Eptesicus bottae | Botta's Serotine |
| Otonycteris hemprichii | Hemprich's Long-eared Bat |
| Barbastella barbestellus* | Barbastelle |
| Plecotus austriacus | Gray Long-eared Bat |
| Miniopterus schreibersi | Schreiber's Bat, Long-wind Bat |
| Family: Molosidae: | |
| Tadarida teniotis | European Free -tailed Bat |
| Tadarida aegyptiaca* | Egyptian Free-tailed Bat |
| Family: Nycteridae: | |
| Nycteris thebaica | Egyptian slit-faced bat |
* Expected to occur but no real Record is found.