Method
1.Dissect embryos in PBS
2.Immediately transfer the embryos to fixative at 4oC, incubate in dark for 15 minutes
3.Rinse the embryos with rinse buffer at room temperature for three times, each 5 minutes
4.Incubate in dark with staining buffer at 37oC overnight
Materials
10% NP40
1% Deoxycholate
0.5 M EGTA (make lM and dilute with 4 M NaOH till dissolves. Check pH = neutral - make up volume for 0.5 M)
0.5 M K3Fe(CN)6 = 1.65 g/10 ml (red)
0.5 M K4Fe(CN)6 = 2.10 g/10 ml (yellow)
40 mg/ml X-gal (in dimethylformamide)
1M MgCl2
1.Fixative
4% Paraformaldehyde in PBS (dissolved at 65oC)
2.Rinse buffer
| Final concentration | Stock |
| 5 mM EGTA | 2.0 ml |
| 0.1% Deoxycholate | 2.0 ml |
| 0.02% NP40 | 0.4 ml |
| 2 mM MgCl2 | 0.4 ml |
| PBS | 195.2 ml |
| Final concentration | Stock |
| 5 mM K3Fe(CN)6 | 0.4 ml |
| 5 mM K4Fe(CN)6 | 0.4 ml |
| 5 mM EGTA | 0.4 ml |
| 0.01% Deoxycholate | 0.4 ml |
| 0.02% NP4O | 80 ul |
| 2 mM MgCl2 | 80 ul |
| PBS | 37.2 ml |
For RNA work, 5 ml of 4 M LiCl is added to 40 ml staining buffer, so that the LiCl concentration is ~0.5 M.