X-gal staining of embryos


Method
1.Dissect embryos in PBS
2.Immediately transfer the embryos to fixative at 4oC, incubate in dark for 15 minutes
3.Rinse the embryos with rinse buffer at room temperature for three times, each 5 minutes
4.Incubate in dark with staining buffer at 37oC overnight

Materials
10% NP40
1% Deoxycholate
0.5 M EGTA (make lM and dilute with 4 M NaOH till dissolves. Check pH = neutral - make up volume for 0.5 M)
0.5 M K3Fe(CN)6 = 1.65 g/10 ml (red)
0.5 M K4Fe(CN)6 = 2.10 g/10 ml (yellow)
40 mg/ml X-gal (in dimethylformamide)
1M MgCl2

1.Fixative
4% Paraformaldehyde in PBS (dissolved at 65oC)


2.Rinse buffer
 Final concentration  Stock
 5 mM EGTA  2.0 ml
 0.1% Deoxycholate  2.0 ml
 0.02% NP40  0.4 ml
 2 mM MgCl2  0.4 ml
 PBS  195.2 ml

3.Staining buffer
 Final concentration  Stock
 5 mM K3Fe(CN)6  0.4 ml
 5 mM K4Fe(CN)6  0.4 ml
 5 mM EGTA  0.4 ml
 0.01% Deoxycholate  0.4 ml
 0.02% NP4O  80 ul
 2 mM MgCl2  80 ul
 PBS  37.2 ml

Finally, add 1 ml of 40 mg/ml X-gal solution (in dimethyformamide) to the staining buffer slowly.

For RNA work, 5 ml of 4 M LiCl is added to 40 ml staining buffer, so that the LiCl concentration is ~0.5 M.

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